Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm6089-201ENSMUST00000197666 938 ntBASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc18Q80WC3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tnrc18Q80WC3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc18Q80WC3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc18Q80WC3 Gm43438-201ENSMUST00000198133 379 ntBASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc18Q80WC3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Gm27321-201ENSMUST00000185021 205 ntBASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Mir8117-201ENSMUST00000184773 107 ntBASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc18Q80WC3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms