Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Gm9731-201ENSMUST00000209480 747 ntBASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Il3ra-202ENSMUST00000223589 738 ntBASIC19.36■□□□□ 0.69
Prpf40bQ80W14 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf40bQ80W14 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Gm18733-201ENSMUST00000173950 856 ntBASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Gm43347-201ENSMUST00000200226 580 ntBASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf40bQ80W14 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Gm37722-201ENSMUST00000193757 208 ntBASIC19.34■□□□□ 0.69
Prpf40bQ80W14 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.34■□□□□ 0.69
Prpf40bQ80W14 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf40bQ80W14 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf40bQ80W14 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Prpf40bQ80W14 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf40bQ80W14 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.33■□□□□ 0.69
Prpf40bQ80W14 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf40bQ80W14 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf40bQ80W14 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms