Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.5■□□□□ 0.23
Pcdh19Q80TF3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Mir770-201ENSMUST00000103252 94 ntBASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh19Q80TF3 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh19Q80TF3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Gm11336-201ENSMUST00000118168 334 ntBASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms