Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.53■□□□□ 0.4
Prpf38bQ80SY5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Gm7370-201ENSMUST00000219471 767 ntBASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.52■□□□□ 0.4
Prpf38bQ80SY5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf38bQ80SY5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf38bQ80SY5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf38bQ80SY5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf38bQ80SY5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf38bQ80SY5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Mir2861-201ENSMUST00000175539 82 ntBASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf38bQ80SY5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Gm45328-201ENSMUST00000210942 917 ntBASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38bQ80SY5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms