Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Gm27704-201ENSMUST00000185094 107 ntBASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Gm29518-201ENSMUST00000190858 372 ntBASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Ank2-226ENSMUST00000189368 339 ntBASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Gm17808-201ENSMUST00000200859 894 ntBASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh8Q7TSK3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Gm9103-201ENSMUST00000119371 405 ntBASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Pcdh8Q7TSK3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh8Q7TSK3 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.58■□□□□ 0.25
Pcdh8Q7TSK3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh8Q7TSK3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Actl10-202ENSMUST00000226583 1501 ntBASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh8Q7TSK3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh8Q7TSK3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh8Q7TSK3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh8Q7TSK3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh8Q7TSK3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh8Q7TSK3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh8Q7TSK3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms