Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Gm7290-201ENSMUST00000104990 617 ntBASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Gm12918-201ENSMUST00000120234 636 ntBASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Gm15710-201ENSMUST00000121821 636 ntBASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Gm5075-201ENSMUST00000196916 622 ntBASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Gm10033-202ENSMUST00000211874 928 ntBASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx4Q7TNK1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Gm6365-201ENSMUST00000054711 744 ntBASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfx4Q7TNK1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Gm11927-201ENSMUST00000118472 759 ntBASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx4Q7TNK1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Gm18671-201ENSMUST00000214826 683 ntBASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rfx4Q7TNK1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rfx4Q7TNK1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms