Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.29■□□□□ 0.84
Sned1Q70E20 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sned1Q70E20 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sned1Q70E20 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Sned1Q70E20 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sned1Q70E20 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.28■□□□□ 0.84
Sned1Q70E20 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.28■□□□□ 0.84
Sned1Q70E20 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.28■□□□□ 0.84
Sned1Q70E20 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.28■□□□□ 0.84
Sned1Q70E20 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.28■□□□□ 0.84
Sned1Q70E20 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.28■□□□□ 0.84
Sned1Q70E20 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.28■□□□□ 0.84
Sned1Q70E20 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sned1Q70E20 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sned1Q70E20 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.27■□□□□ 0.84
Sned1Q70E20 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.27■□□□□ 0.84
Sned1Q70E20 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.27■□□□□ 0.84
Sned1Q70E20 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sned1Q70E20 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Sned1Q70E20 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sned1Q70E20 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sned1Q70E20 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.26■□□□□ 0.83
Sned1Q70E20 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sned1Q70E20 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.26■□□□□ 0.83
Sned1Q70E20 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.26■□□□□ 0.83
Sned1Q70E20 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.26■□□□□ 0.83
Sned1Q70E20 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Sned1Q70E20 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sned1Q70E20 Grk6-206ENSMUST00000224995 2971 ntBASIC20.25■□□□□ 0.83
Sned1Q70E20 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.25■□□□□ 0.83
Sned1Q70E20 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.25■□□□□ 0.83
Sned1Q70E20 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.25■□□□□ 0.83
Sned1Q70E20 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.25■□□□□ 0.83
Sned1Q70E20 Gm8655-201ENSMUST00000221159 852 ntBASIC20.25■□□□□ 0.83
Sned1Q70E20 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Sned1Q70E20 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sned1Q70E20 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sned1Q70E20 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sned1Q70E20 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sned1Q70E20 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sned1Q70E20 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.24■□□□□ 0.83
Sned1Q70E20 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sned1Q70E20 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sned1Q70E20 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.24■□□□□ 0.83
Sned1Q70E20 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sned1Q70E20 Gm14701-201ENSMUST00000117156 348 ntBASIC20.24■□□□□ 0.83
Sned1Q70E20 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.24■□□□□ 0.83
Sned1Q70E20 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sned1Q70E20 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.24■□□□□ 0.83
Sned1Q70E20 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.24■□□□□ 0.83
Sned1Q70E20 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms