Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm12260-201ENSMUST00000122447 411 ntBASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Gm15467-201ENSMUST00000120582 445 ntBASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Gm14822-201ENSMUST00000122247 291 ntBASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Gm8097-201ENSMUST00000117903 829 ntBASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nup188Q6ZQH8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nup188Q6ZQH8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Gm2756-201ENSMUST00000195851 400 ntBASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nup188Q6ZQH8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Gm13418-201ENSMUST00000119097 944 ntBASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Gm14140-201ENSMUST00000119999 995 ntBASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Gm8969-201ENSMUST00000199694 526 ntBASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup188Q6ZQH8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nup188Q6ZQH8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nup188Q6ZQH8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Gm14494-201ENSMUST00000118786 435 ntBASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup188Q6ZQH8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms