Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.14□□□□□ -0.15
Rif1Q6PR54 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.14□□□□□ -0.15
Rif1Q6PR54 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Rif1Q6PR54 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.13□□□□□ -0.15
Rif1Q6PR54 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.13□□□□□ -0.15
Rif1Q6PR54 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.13□□□□□ -0.15
Rif1Q6PR54 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.13□□□□□ -0.15
Rif1Q6PR54 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rif1Q6PR54 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.12□□□□□ -0.15
Rif1Q6PR54 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.12□□□□□ -0.15
Rif1Q6PR54 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rif1Q6PR54 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.12□□□□□ -0.15
Rif1Q6PR54 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Mir3102-201ENSMUST00000175555 104 ntBASIC14.11□□□□□ -0.15
Rif1Q6PR54 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.11□□□□□ -0.15
Rif1Q6PR54 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.11□□□□□ -0.15
Rif1Q6PR54 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Rif1Q6PR54 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms