Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Gm18733-201ENSMUST00000173950 856 ntBASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.79■□□□□ 0.76
Nup98Q6PFD9 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.78■□□□□ 0.76
Nup98Q6PFD9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nup98Q6PFD9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Gm11452-201ENSMUST00000122376 690 ntBASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup98Q6PFD9 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.76■□□□□ 0.75
Nup98Q6PFD9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Gm7506-201ENSMUST00000207758 815 ntBASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup98Q6PFD9 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Rarb-207ENSMUST00000225921 2756 ntBASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Gm2651-201ENSMUST00000203560 838 ntBASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.75■□□□□ 0.75
Nup98Q6PFD9 Gm13312-201ENSMUST00000119631 718 ntBASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Gm25745-201ENSMUST00000174945 133 ntBASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Gm36967-201ENSMUST00000193814 266 ntBASIC19.74■□□□□ 0.75
Nup98Q6PFD9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup98Q6PFD9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup98Q6PFD9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms