Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcc2Q6PDG5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Smarcc2Q6PDG5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smarcc2Q6PDG5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcc2Q6PDG5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Smarcc2Q6PDG5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcc2Q6PDG5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcc2Q6PDG5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcc2Q6PDG5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcc2Q6PDG5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc2Q6PDG5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.58■□□□□ 0.72
Smarcc2Q6PDG5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc2Q6PDG5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc2Q6PDG5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc2Q6PDG5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc2Q6PDG5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc2Q6PDG5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc2Q6PDG5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Gm7977-201ENSMUST00000193787 748 ntBASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Smarcc2Q6PDG5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms