Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Gm11355-201ENSMUST00000121120 306 ntBASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Hmgb4Q6P8W9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Gm26039-201ENSMUST00000158152 144 ntBASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgb4Q6P8W9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.58■□□□□ 0.41
Hmgb4Q6P8W9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgb4Q6P8W9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Gm18958-201ENSMUST00000174258 762 ntBASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgb4Q6P8W9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgb4Q6P8W9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms