Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Abcf1Q6P542 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.81■□□□□ 0.6
Abcf1Q6P542 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Gm18025-201ENSMUST00000221733 862 ntBASIC18.81■□□□□ 0.6
Abcf1Q6P542 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.8■□□□□ 0.6
Abcf1Q6P542 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Gm11643-201ENSMUST00000119578 864 ntBASIC18.8■□□□□ 0.6
Abcf1Q6P542 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.8■□□□□ 0.6
Abcf1Q6P542 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcf1Q6P542 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.79■□□□□ 0.6
Abcf1Q6P542 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Gm42545-201ENSMUST00000202755 922 ntBASIC18.79■□□□□ 0.6
Abcf1Q6P542 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcf1Q6P542 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Abcf1Q6P542 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcf1Q6P542 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Gm43183-201ENSMUST00000200632 547 ntBASIC18.77■□□□□ 0.6
Abcf1Q6P542 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcf1Q6P542 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.77■□□□□ 0.6
Abcf1Q6P542 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Abcf1Q6P542 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Abcf1Q6P542 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Abcf1Q6P542 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms