Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp140Q6NSQ5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp140Q6NSQ5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Gm18958-201ENSMUST00000174258 762 ntBASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sp140Q6NSQ5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp140Q6NSQ5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sp140Q6NSQ5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp140Q6NSQ5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp140Q6NSQ5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.02■□□□□ 0.31
Sp140Q6NSQ5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp140Q6NSQ5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sp140Q6NSQ5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp140Q6NSQ5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp140Q6NSQ5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sp140Q6NSQ5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sp140Q6NSQ5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sp140Q6NSQ5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sp140Q6NSQ5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms