Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg2Q6NS82 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg2Q6NS82 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Gm6659-201ENSMUST00000174752 547 ntBASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg2Q6NS82 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Gm10819-201ENSMUST00000099988 561 ntBASIC18.09■□□□□ 0.49
Retreg2Q6NS82 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg2Q6NS82 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg2Q6NS82 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg2Q6NS82 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg2Q6NS82 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg2Q6NS82 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg2Q6NS82 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg2Q6NS82 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retreg2Q6NS82 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Mir5130-201ENSMUST00000175160 84 ntBASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.07■□□□□ 0.48
Retreg2Q6NS82 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg2Q6NS82 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Gm7367-201ENSMUST00000057611 492 ntBASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg2Q6NS82 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms