Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm4Q6IRU2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm4Q6IRU2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm4Q6IRU2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm4Q6IRU2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Gm18025-201ENSMUST00000221733 862 ntBASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm4Q6IRU2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Gm13216-201ENSMUST00000117145 591 ntBASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Gm12382-201ENSMUST00000122005 922 ntBASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.79■□□□□ 0.6
Tpm4Q6IRU2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms