Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.18■□□□□ 0.34
Cep290Q6A078 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.18■□□□□ 0.34
Cep290Q6A078 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cep290Q6A078 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.17■□□□□ 0.34
Cep290Q6A078 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 Idnk-204ENSMUST00000226010 1898 ntBASIC17.17■□□□□ 0.34
Cep290Q6A078 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cep290Q6A078 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cep290Q6A078 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Cep290Q6A078 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.16■□□□□ 0.34
Cep290Q6A078 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.16■□□□□ 0.34
Cep290Q6A078 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cep290Q6A078 Gm43767-201ENSMUST00000198933 381 ntBASIC17.16■□□□□ 0.34
Cep290Q6A078 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cep290Q6A078 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.15■□□□□ 0.34
Cep290Q6A078 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.15■□□□□ 0.34
Cep290Q6A078 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cep290Q6A078 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.15■□□□□ 0.34
Cep290Q6A078 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.15■□□□□ 0.34
Cep290Q6A078 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cep290Q6A078 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.14■□□□□ 0.34
Cep290Q6A078 Mir8117-201ENSMUST00000184773 107 ntBASIC17.14■□□□□ 0.34
Cep290Q6A078 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.14■□□□□ 0.34
Cep290Q6A078 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cep290Q6A078 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cep290Q6A078 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cep290Q6A078 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cep290Q6A078 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Cep290Q6A078 Gm12497-201ENSMUST00000138778 237 ntBASIC17.14■□□□□ 0.33
Cep290Q6A078 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.14■□□□□ 0.33
Cep290Q6A078 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cep290Q6A078 Gm7506-201ENSMUST00000207758 815 ntBASIC17.14■□□□□ 0.33
Cep290Q6A078 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cep290Q6A078 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cep290Q6A078 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.14■□□□□ 0.33
Cep290Q6A078 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cep290Q6A078 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cep290Q6A078 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cep290Q6A078 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cep290Q6A078 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Mir7023-201ENSMUST00000185093 64 ntBASIC17.13■□□□□ 0.33
Cep290Q6A078 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.13■□□□□ 0.33
Cep290Q6A078 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.13■□□□□ 0.33
Cep290Q6A078 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.13■□□□□ 0.33
Cep290Q6A078 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cep290Q6A078 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.13■□□□□ 0.33
Cep290Q6A078 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.13■□□□□ 0.33
Cep290Q6A078 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.13■□□□□ 0.33
Cep290Q6A078 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Gm44450-201ENSMUST00000199528 114 ntBASIC17.13■□□□□ 0.33
Cep290Q6A078 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.13■□□□□ 0.33
Cep290Q6A078 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cep290Q6A078 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cep290Q6A078 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms