Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctnna3Q65CL1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctnna3Q65CL1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ctnna3Q65CL1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Gm22697-201ENSMUST00000175194 63 ntBASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Gm38027-201ENSMUST00000192315 235 ntBASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ctnna3Q65CL1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ctnna3Q65CL1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ctnna3Q65CL1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.89■□□□□ 0.62
Ctnna3Q65CL1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ctnna3Q65CL1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.89■□□□□ 0.61
Ctnna3Q65CL1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ctnna3Q65CL1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms