Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Clcn1Q64347 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.22■□□□□ 0.99
Clcn1Q64347 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Clcn1Q64347 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.22■□□□□ 0.99
Clcn1Q64347 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.22■□□□□ 0.99
Clcn1Q64347 Gm5867-201ENSMUST00000063197 592 ntBASIC21.22■□□□□ 0.99
Clcn1Q64347 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Clcn1Q64347 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn1Q64347 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn1Q64347 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn1Q64347 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn1Q64347 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.21■□□□□ 0.99
Clcn1Q64347 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn1Q64347 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn1Q64347 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn1Q64347 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.21■□□□□ 0.99
Clcn1Q64347 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.21■□□□□ 0.99
Clcn1Q64347 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn1Q64347 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn1Q64347 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.21■□□□□ 0.99
Clcn1Q64347 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Clcn1Q64347 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.2■□□□□ 0.98
Clcn1Q64347 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Clcn1Q64347 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Clcn1Q64347 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Clcn1Q64347 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Clcn1Q64347 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.2■□□□□ 0.98
Clcn1Q64347 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Clcn1Q64347 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn1Q64347 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Gm44450-201ENSMUST00000199528 114 ntBASIC21.19■□□□□ 0.98
Clcn1Q64347 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Clcn1Q64347 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn1Q64347 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.18■□□□□ 0.98
Clcn1Q64347 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Clcn1Q64347 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.18■□□□□ 0.98
Clcn1Q64347 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.18■□□□□ 0.98
Clcn1Q64347 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.18■□□□□ 0.98
Clcn1Q64347 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.18■□□□□ 0.98
Clcn1Q64347 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn1Q64347 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Clcn1Q64347 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn1Q64347 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn1Q64347 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn1Q64347 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn1Q64347 Gm27525-201ENSMUST00000184465 107 ntBASIC21.17■□□□□ 0.98
Clcn1Q64347 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Clcn1Q64347 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn1Q64347 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn1Q64347 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Clcn1Q64347 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Clcn1Q64347 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.17■□□□□ 0.98
Clcn1Q64347 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn1Q64347 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms