Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptp4a1Q63739 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Gm13168-201ENSMUST00000121771 632 ntBASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Gm15378-201ENSMUST00000121894 207 ntBASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptp4a1Q63739 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptp4a1Q63739 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Gm17661-201ENSMUST00000170317 270 ntBASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptp4a1Q63739 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptp4a1Q63739 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptp4a1Q63739 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.1■□□□□ 0.01
Ptp4a1Q63739 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptp4a1Q63739 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptp4a1Q63739 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ptp4a1Q63739 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms