Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.46□□□□□ -0.09
Vamp1Q62442 Gm43017-201ENSMUST00000198296 752 ntBASIC14.46□□□□□ -0.09
Vamp1Q62442 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vamp1Q62442 Gm6139-201ENSMUST00000079261 882 ntBASIC14.46□□□□□ -0.09
Vamp1Q62442 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vamp1Q62442 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vamp1Q62442 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Vamp1Q62442 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vamp1Q62442 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vamp1Q62442 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.45□□□□□ -0.1
Vamp1Q62442 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vamp1Q62442 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Vamp1Q62442 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.45□□□□□ -0.1
Vamp1Q62442 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Vamp1Q62442 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vamp1Q62442 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.45□□□□□ -0.1
Vamp1Q62442 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp1Q62442 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.44□□□□□ -0.1
Vamp1Q62442 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.44□□□□□ -0.1
Vamp1Q62442 Gm10418-201ENSMUST00000100943 576 ntBASIC14.44□□□□□ -0.1
Vamp1Q62442 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.44□□□□□ -0.1
Vamp1Q62442 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Vamp1Q62442 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.44□□□□□ -0.1
Vamp1Q62442 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vamp1Q62442 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp1Q62442 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vamp1Q62442 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vamp1Q62442 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vamp1Q62442 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vamp1Q62442 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Vamp1Q62442 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.43□□□□□ -0.1
Vamp1Q62442 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp1Q62442 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.42□□□□□ -0.1
Vamp1Q62442 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vamp1Q62442 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Vamp1Q62442 Gm12821-201ENSMUST00000120022 600 ntBASIC14.42□□□□□ -0.1
Vamp1Q62442 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Vamp1Q62442 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.42□□□□□ -0.1
Vamp1Q62442 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Vamp1Q62442 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp1Q62442 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms