Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm38027-201ENSMUST00000192315 235 ntBASIC12.36□□□□□ -0.43
Foxc1Q61572 Gm10175-202ENSMUST00000208752 441 ntBASIC12.36□□□□□ -0.43
Foxc1Q61572 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Foxc1Q61572 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Foxc1Q61572 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Foxc1Q61572 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Gm12085-201ENSMUST00000119263 940 ntBASIC12.35□□□□□ -0.43
Foxc1Q61572 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.35□□□□□ -0.43
Foxc1Q61572 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.35□□□□□ -0.43
Foxc1Q61572 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxc1Q61572 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.34□□□□□ -0.43
Foxc1Q61572 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.34□□□□□ -0.43
Foxc1Q61572 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Gm37025-201ENSMUST00000195159 829 ntBASIC12.34□□□□□ -0.43
Foxc1Q61572 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.34□□□□□ -0.43
Foxc1Q61572 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.34□□□□□ -0.43
Foxc1Q61572 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxc1Q61572 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Foxc1Q61572 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Foxc1Q61572 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Foxc1Q61572 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Foxc1Q61572 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.33□□□□□ -0.44
Foxc1Q61572 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Foxc1Q61572 Gm27463-201ENSMUST00000183569 57 ntBASIC12.33□□□□□ -0.44
Foxc1Q61572 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.33□□□□□ -0.44
Foxc1Q61572 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.33□□□□□ -0.44
Foxc1Q61572 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Foxc1Q61572 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.33□□□□□ -0.44
Foxc1Q61572 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Foxc1Q61572 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxc1Q61572 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms