Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.54■□□□□ 0.4
Smarcd1Q61466 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd1Q61466 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Gm29518-201ENSMUST00000190858 372 ntBASIC17.54■□□□□ 0.4
Smarcd1Q61466 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smarcd1Q61466 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.54■□□□□ 0.4
Smarcd1Q61466 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd1Q61466 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.54■□□□□ 0.4
Smarcd1Q61466 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Gm17808-201ENSMUST00000200859 894 ntBASIC17.53■□□□□ 0.4
Smarcd1Q61466 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd1Q61466 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd1Q61466 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd1Q61466 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smarcd1Q61466 Mir770-201ENSMUST00000103252 94 ntBASIC17.52■□□□□ 0.4
Smarcd1Q61466 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.52■□□□□ 0.4
Smarcd1Q61466 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd1Q61466 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd1Q61466 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd1Q61466 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd1Q61466 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd1Q61466 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Smarcd1Q61466 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd1Q61466 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.52■□□□□ 0.39
Smarcd1Q61466 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Gm11950-201ENSMUST00000121615 838 ntBASIC17.51■□□□□ 0.39
Smarcd1Q61466 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Gm6623-201ENSMUST00000173570 544 ntBASIC17.51■□□□□ 0.39
Smarcd1Q61466 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.51■□□□□ 0.39
Smarcd1Q61466 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd1Q61466 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.51■□□□□ 0.39
Smarcd1Q61466 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Gm44450-201ENSMUST00000199528 114 ntBASIC17.5■□□□□ 0.39
Smarcd1Q61466 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.5■□□□□ 0.39
Smarcd1Q61466 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms