Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.41■□□□□ 0.22
Vsx2Q61412 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Gm13559-201ENSMUST00000120476 863 ntBASIC16.41■□□□□ 0.22
Vsx2Q61412 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vsx2Q61412 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vsx2Q61412 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.4■□□□□ 0.22
Vsx2Q61412 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.4■□□□□ 0.22
Vsx2Q61412 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Gm9987-201ENSMUST00000069768 567 ntBASIC16.4■□□□□ 0.22
Vsx2Q61412 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vsx2Q61412 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.4■□□□□ 0.22
Vsx2Q61412 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vsx2Q61412 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vsx2Q61412 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Vsx2Q61412 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vsx2Q61412 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.39■□□□□ 0.21
Vsx2Q61412 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Gm6433-201ENSMUST00000118634 875 ntBASIC16.39■□□□□ 0.21
Vsx2Q61412 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.39■□□□□ 0.21
Vsx2Q61412 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.39■□□□□ 0.21
Vsx2Q61412 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.39■□□□□ 0.21
Vsx2Q61412 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx2Q61412 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Vsx2Q61412 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.38■□□□□ 0.21
Vsx2Q61412 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vsx2Q61412 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vsx2Q61412 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Gm37025-201ENSMUST00000195159 829 ntBASIC16.38■□□□□ 0.21
Vsx2Q61412 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.38■□□□□ 0.21
Vsx2Q61412 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.38■□□□□ 0.21
Vsx2Q61412 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vsx2Q61412 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx2Q61412 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx2Q61412 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx2Q61412 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.37■□□□□ 0.21
Vsx2Q61412 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.37■□□□□ 0.21
Vsx2Q61412 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx2Q61412 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Vsx2Q61412 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Vsx2Q61412 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms