Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Sim1Q61045 Gm27742-201ENSMUST00000184667 60 ntBASIC16.66■□□□□ 0.26
Sim1Q61045 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.66■□□□□ 0.26
Sim1Q61045 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim1Q61045 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim1Q61045 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim1Q61045 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim1Q61045 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Sim1Q61045 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim1Q61045 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim1Q61045 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim1Q61045 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim1Q61045 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Sim1Q61045 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.65■□□□□ 0.26
Sim1Q61045 Gm28659-201ENSMUST00000188013 759 ntBASIC16.65■□□□□ 0.26
Sim1Q61045 Gm37025-201ENSMUST00000195159 829 ntBASIC16.65■□□□□ 0.26
Sim1Q61045 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.65■□□□□ 0.26
Sim1Q61045 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sim1Q61045 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.65■□□□□ 0.26
Sim1Q61045 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.65■□□□□ 0.26
Sim1Q61045 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sim1Q61045 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.64■□□□□ 0.25
Sim1Q61045 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.64■□□□□ 0.25
Sim1Q61045 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sim1Q61045 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Gm6623-201ENSMUST00000173570 544 ntBASIC16.64■□□□□ 0.25
Sim1Q61045 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.64■□□□□ 0.25
Sim1Q61045 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.64■□□□□ 0.25
Sim1Q61045 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sim1Q61045 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.64■□□□□ 0.25
Sim1Q61045 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.64■□□□□ 0.25
Sim1Q61045 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.64■□□□□ 0.25
Sim1Q61045 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.64■□□□□ 0.25
Sim1Q61045 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim1Q61045 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.63■□□□□ 0.25
Sim1Q61045 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.63■□□□□ 0.25
Sim1Q61045 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim1Q61045 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.62■□□□□ 0.25
Sim1Q61045 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sim1Q61045 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sim1Q61045 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Sim1Q61045 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sim1Q61045 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sim1Q61045 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim1Q61045 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sim1Q61045 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.61■□□□□ 0.25
Sim1Q61045 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sim1Q61045 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms