Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.61■□□□□ 0.25
Col12a1Q60847 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.61■□□□□ 0.25
Col12a1Q60847 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.61■□□□□ 0.25
Col12a1Q60847 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.61■□□□□ 0.25
Col12a1Q60847 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.6■□□□□ 0.25
Col12a1Q60847 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.6■□□□□ 0.25
Col12a1Q60847 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col12a1Q60847 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.6■□□□□ 0.25
Col12a1Q60847 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.6■□□□□ 0.25
Col12a1Q60847 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col12a1Q60847 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Col12a1Q60847 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.59■□□□□ 0.25
Col12a1Q60847 Gm23547-201ENSMUST00000158210 271 ntBASIC16.59■□□□□ 0.25
Col12a1Q60847 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.59■□□□□ 0.25
Col12a1Q60847 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.59■□□□□ 0.25
Col12a1Q60847 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col12a1Q60847 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col12a1Q60847 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col12a1Q60847 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col12a1Q60847 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col12a1Q60847 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col12a1Q60847 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Gm44430-201ENSMUST00000203376 995 ntBASIC16.58■□□□□ 0.24
Col12a1Q60847 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Col12a1Q60847 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Col12a1Q60847 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.58■□□□□ 0.24
Col12a1Q60847 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.58■□□□□ 0.24
Col12a1Q60847 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col12a1Q60847 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.58■□□□□ 0.24
Col12a1Q60847 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col12a1Q60847 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.57■□□□□ 0.24
Col12a1Q60847 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Col12a1Q60847 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.57■□□□□ 0.24
Col12a1Q60847 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.57■□□□□ 0.24
Col12a1Q60847 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col12a1Q60847 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Col12a1Q60847 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Gm11025-201ENSMUST00000140773 466 ntBASIC16.56■□□□□ 0.24
Col12a1Q60847 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.56■□□□□ 0.24
Col12a1Q60847 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.56■□□□□ 0.24
Col12a1Q60847 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms