Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom1Q5SX79 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.87■□□□□ 0.45
Shroom1Q5SX79 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Gm6623-201ENSMUST00000173570 544 ntBASIC17.86■□□□□ 0.45
Shroom1Q5SX79 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.86■□□□□ 0.45
Shroom1Q5SX79 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Mir770-201ENSMUST00000103252 94 ntBASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Gm45328-201ENSMUST00000210942 917 ntBASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom1Q5SX79 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms