Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC29.24■■■□□ 2.27
Pds5bQ4VA53 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Pds5bQ4VA53 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Pds5bQ4VA53 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Pds5bQ4VA53 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Pds5bQ4VA53 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC29.23■■■□□ 2.27
Pds5bQ4VA53 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC29.23■■■□□ 2.27
Pds5bQ4VA53 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Pds5bQ4VA53 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC29.23■■■□□ 2.27
Pds5bQ4VA53 AC140375.2-201ENSMUST00000225283 584 ntBASIC29.23■■■□□ 2.27
Pds5bQ4VA53 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pds5bQ4VA53 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pds5bQ4VA53 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Gm27300-201ENSMUST00000184085 97 ntBASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Gm27335-201ENSMUST00000184758 97 ntBASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Pds5bQ4VA53 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Gm23547-201ENSMUST00000158210 271 ntBASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pds5bQ4VA53 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Pds5bQ4VA53 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Pds5bQ4VA53 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC29.2■■■□□ 2.27
Pds5bQ4VA53 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC29.2■■■□□ 2.27
Pds5bQ4VA53 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
Pds5bQ4VA53 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.27
Pds5bQ4VA53 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Pds5bQ4VA53 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Pds5bQ4VA53 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Pds5bQ4VA53 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pds5bQ4VA53 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pds5bQ4VA53 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC29.18■■■□□ 2.26
Pds5bQ4VA53 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Gm45612-201ENSMUST00000211320 160 ntBASIC29.17■■■□□ 2.26
Pds5bQ4VA53 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Ddx41-204ENSMUST00000224765 2199 ntBASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Pds5bQ4VA53 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pds5bQ4VA53 AC125311.2-201ENSMUST00000227477 1940 ntBASIC29.15■■■□□ 2.26
Pds5bQ4VA53 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Pds5bQ4VA53 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Pds5bQ4VA53 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC29.15■■■□□ 2.26
Pds5bQ4VA53 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms