Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.41■□□□□ 0.38
Trim80Q3V061 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim80Q3V061 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Trim80Q3V061 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim80Q3V061 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Gm44549-201ENSMUST00000208351 577 ntBASIC17.4■□□□□ 0.38
Trim80Q3V061 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim80Q3V061 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim80Q3V061 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim80Q3V061 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim80Q3V061 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim80Q3V061 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trim80Q3V061 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim80Q3V061 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim80Q3V061 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim80Q3V061 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim80Q3V061 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Trim80Q3V061 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim80Q3V061 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim80Q3V061 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim80Q3V061 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Trim80Q3V061 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim80Q3V061 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim80Q3V061 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Gm715-201ENSMUST00000117865 831 ntBASIC17.38■□□□□ 0.37
Trim80Q3V061 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Trim80Q3V061 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim80Q3V061 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trim80Q3V061 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim80Q3V061 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim80Q3V061 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim80Q3V061 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.37■□□□□ 0.37
Trim80Q3V061 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim80Q3V061 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim80Q3V061 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trim80Q3V061 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim80Q3V061 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.37■□□□□ 0.37
Trim80Q3V061 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim80Q3V061 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim80Q3V061 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim80Q3V061 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms