Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Gm44450-201ENSMUST00000199528 114 ntBASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsmem1Q3UQS2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsmem1Q3UQS2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Gm11336-201ENSMUST00000118168 334 ntBASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsmem1Q3UQS2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsmem1Q3UQS2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsmem1Q3UQS2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsmem1Q3UQS2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsmem1Q3UQS2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Lsmem1Q3UQS2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsmem1Q3UQS2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsmem1Q3UQS2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.02■□□□□ 0.31
Lsmem1Q3UQS2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Lsmem1Q3UQS2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Gm13216-201ENSMUST00000117145 591 ntBASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsmem1Q3UQS2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms