Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Gm9103-201ENSMUST00000119371 405 ntBASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Gm6623-201ENSMUST00000173570 544 ntBASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Naf1Q3UMQ8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Naf1Q3UMQ8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Naf1Q3UMQ8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.08■□□□□ 0.33
Naf1Q3UMQ8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.08■□□□□ 0.33
Naf1Q3UMQ8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Naf1Q3UMQ8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Naf1Q3UMQ8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Naf1Q3UMQ8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.07■□□□□ 0.32
Naf1Q3UMQ8 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Naf1Q3UMQ8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Gm11336-201ENSMUST00000118168 334 ntBASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Naf1Q3UMQ8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms