Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Gm7213-201ENSMUST00000215977 950 ntBASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Mir1668-201ENSMUST00000184114 107 ntBASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Gm18032-201ENSMUST00000222541 538 ntBASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf44Q3UHJ8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf44Q3UHJ8 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf44Q3UHJ8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Actl10-202ENSMUST00000226583 1501 ntBASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf44Q3UHJ8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf44Q3UHJ8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms