Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Gm13559-201ENSMUST00000120476 863 ntBASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.39■□□□□ 0.53
Rapgef1Q3UHC1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rapgef1Q3UHC1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rapgef1Q3UHC1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Gm11539-201ENSMUST00000119837 557 ntBASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Gm13436-201ENSMUST00000120418 567 ntBASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rapgef1Q3UHC1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Gm12085-201ENSMUST00000119263 940 ntBASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Gm27463-201ENSMUST00000183569 57 ntBASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rapgef1Q3UHC1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms