Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Spg11Q3UHA3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Gm27437-201ENSMUST00000183429 107 ntBASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Gm7653-201ENSMUST00000214567 508 ntBASIC15.47■□□□□ 0.07
Spg11Q3UHA3 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Spg11Q3UHA3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Gm17271-201ENSMUST00000165535 355 ntBASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Grk6-206ENSMUST00000224995 2971 ntBASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Mir1895-201ENSMUST00000122615 79 ntBASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Spg11Q3UHA3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Spg11Q3UHA3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Spg11Q3UHA3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Spg11Q3UHA3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Spg11Q3UHA3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Gm5682-201ENSMUST00000173402 505 ntBASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Spg11Q3UHA3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Spg11Q3UHA3 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms