Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Gm7791-201ENSMUST00000219066 539 ntBASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.84■□□□□ 0.13
Brf2Q3UAW9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Brf2Q3UAW9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Brf2Q3UAW9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Brf2Q3UAW9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Brf2Q3UAW9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brf2Q3UAW9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Brf2Q3UAW9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brf2Q3UAW9 Gm13216-201ENSMUST00000117145 591 ntBASIC15.83■□□□□ 0.12
Brf2Q3UAW9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.83■□□□□ 0.12
Brf2Q3UAW9 Mir5122-201ENSMUST00000175004 89 ntBASIC15.83■□□□□ 0.12
Brf2Q3UAW9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brf2Q3UAW9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brf2Q3UAW9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brf2Q3UAW9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brf2Q3UAW9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Brf2Q3UAW9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Gm21814-202ENSMUST00000203277 873 ntBASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brf2Q3UAW9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Gm27463-201ENSMUST00000183569 57 ntBASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brf2Q3UAW9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Brf2Q3UAW9 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.79■□□□□ 0.12
Brf2Q3UAW9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.79■□□□□ 0.12
Brf2Q3UAW9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms