Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim7Q3TJD7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim7Q3TJD7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Gm43575-201ENSMUST00000196420 516 ntBASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim7Q3TJD7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim7Q3TJD7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim7Q3TJD7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim7Q3TJD7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim7Q3TJD7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim7Q3TJD7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim7Q3TJD7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim7Q3TJD7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim7Q3TJD7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim7Q3TJD7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Gm15467-201ENSMUST00000120582 445 ntBASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Gm6736-201ENSMUST00000166583 948 ntBASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms