Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Gm27389-201ENSMUST00000183622 195 ntBASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Khdc4Q3TCX3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Gm8258-201ENSMUST00000055593 1449 ntBASIC16■□□□□ 0.15
Khdc4Q3TCX3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Khdc4Q3TCX3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Mir8112-201ENSMUST00000184382 131 ntBASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Gm27741-201ENSMUST00000185060 237 ntBASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Gm7370-201ENSMUST00000219471 767 ntBASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Gm21559-201ENSMUST00000220638 855 ntBASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Gm8587-201ENSMUST00000076538 843 ntBASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.99■□□□□ 0.15
Khdc4Q3TCX3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Gm7284-201ENSMUST00000131667 944 ntBASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Ank2-226ENSMUST00000189368 339 ntBASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Khdc4Q3TCX3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Khdc4Q3TCX3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Khdc4Q3TCX3 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.97■□□□□ 0.15
Khdc4Q3TCX3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Khdc4Q3TCX3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Khdc4Q3TCX3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Khdc4Q3TCX3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms