Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna5Q2MKA5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna5Q2MKA5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Gm25745-201ENSMUST00000174945 133 ntBASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna5Q2MKA5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Gm13418-201ENSMUST00000119097 944 ntBASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Gm7506-201ENSMUST00000207758 815 ntBASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna5Q2MKA5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Gm2213-201ENSMUST00000197485 688 ntBASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna5Q2MKA5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Gm27702-201ENSMUST00000184512 56 ntBASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna5Q2MKA5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.92■□□□□ 0.78
Chrna5Q2MKA5 Gm4995-201ENSMUST00000117247 432 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms