Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptchd3Q0EEE2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.27■□□□□ 0.2
Ptchd3Q0EEE2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.27■□□□□ 0.2
Ptchd3Q0EEE2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.27■□□□□ 0.2
Ptchd3Q0EEE2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptchd3Q0EEE2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptchd3Q0EEE2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ptchd3Q0EEE2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.27■□□□□ 0.19
Ptchd3Q0EEE2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ptchd3Q0EEE2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Gm12527-201ENSMUST00000117967 564 ntBASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ptchd3Q0EEE2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Gm10418-201ENSMUST00000100943 576 ntBASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptchd3Q0EEE2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Gm37856-201ENSMUST00000191634 999 ntBASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms