Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col17a1Q07563 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col17a1Q07563 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col17a1Q07563 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Gm7507-201ENSMUST00000183053 1008 ntBASIC25.92■■□□□ 1.74
Col17a1Q07563 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC25.92■■□□□ 1.74
Col17a1Q07563 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC25.92■■□□□ 1.74
Col17a1Q07563 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC25.92■■□□□ 1.74
Col17a1Q07563 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col17a1Q07563 Mir6420-201ENSMUST00000185032 102 ntBASIC25.91■■□□□ 1.74
Col17a1Q07563 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col17a1Q07563 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col17a1Q07563 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col17a1Q07563 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Mir449b-201ENSMUST00000104833 80 ntBASIC25.91■■□□□ 1.74
Col17a1Q07563 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Col17a1Q07563 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col17a1Q07563 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC25.9■■□□□ 1.74
Col17a1Q07563 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Col17a1Q07563 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col17a1Q07563 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC25.9■■□□□ 1.74
Col17a1Q07563 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Col17a1Q07563 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Col17a1Q07563 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Col17a1Q07563 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Col17a1Q07563 Gm6007-201ENSMUST00000208170 823 ntBASIC25.9■■□□□ 1.74
Col17a1Q07563 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC25.89■■□□□ 1.74
Col17a1Q07563 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Col17a1Q07563 Zfp264-201ENSMUST00000208656 1563 ntBASIC25.89■■□□□ 1.74
Col17a1Q07563 Gm13597-201ENSMUST00000121239 375 ntBASIC25.89■■□□□ 1.73
Col17a1Q07563 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Col17a1Q07563 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Col17a1Q07563 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Col17a1Q07563 AC127302.2-201ENSMUST00000215212 268 ntBASIC25.89■■□□□ 1.73
Col17a1Q07563 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Col17a1Q07563 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC25.89■■□□□ 1.73
Col17a1Q07563 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
Col17a1Q07563 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Col17a1Q07563 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Col17a1Q07563 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
Col17a1Q07563 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Gm15427-201ENSMUST00000117288 531 ntBASIC25.88■■□□□ 1.73
Col17a1Q07563 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC25.88■■□□□ 1.73
Col17a1Q07563 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Mir8112-201ENSMUST00000184382 131 ntBASIC25.88■■□□□ 1.73
Col17a1Q07563 Gm43125-201ENSMUST00000201724 730 ntBASIC25.88■■□□□ 1.73
Col17a1Q07563 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Col17a1Q07563 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Col17a1Q07563 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Col17a1Q07563 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC25.87■■□□□ 1.73
Col17a1Q07563 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col17a1Q07563 Nrn1-204ENSMUST00000224323 1779 ntBASIC25.87■■□□□ 1.73
Col17a1Q07563 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col17a1Q07563 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.87■■□□□ 1.73
Col17a1Q07563 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col17a1Q07563 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC25.87■■□□□ 1.73
Col17a1Q07563 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col17a1Q07563 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
Col17a1Q07563 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col17a1Q07563 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Col17a1Q07563 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col17a1Q07563 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col17a1Q07563 AC154767.3-201ENSMUST00000225150 1342 ntBASIC25.87■■□□□ 1.73
Col17a1Q07563 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col17a1Q07563 Wnt10b-204ENSMUST00000226655 1807 ntBASIC25.87■■□□□ 1.73
Col17a1Q07563 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col17a1Q07563 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col17a1Q07563 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Col17a1Q07563 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Col17a1Q07563 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Col17a1Q07563 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col17a1Q07563 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col17a1Q07563 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col17a1Q07563 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col17a1Q07563 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms