Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps45P97390 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps45P97390 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.38■□□□□ 0.37
Vps45P97390 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vps45P97390 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps45P97390 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps45P97390 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps45P97390 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps45P97390 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.37■□□□□ 0.37
Vps45P97390 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.37■□□□□ 0.37
Vps45P97390 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Vps45P97390 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps45P97390 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps45P97390 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vps45P97390 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps45P97390 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.37■□□□□ 0.37
Vps45P97390 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps45P97390 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps45P97390 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vps45P97390 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps45P97390 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.36■□□□□ 0.37
Vps45P97390 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Vps45P97390 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Vps45P97390 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vps45P97390 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps45P97390 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vps45P97390 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Vps45P97390 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.35■□□□□ 0.37
Vps45P97390 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps45P97390 Gm27000-201ENSMUST00000182943 842 ntBASIC17.35■□□□□ 0.37
Vps45P97390 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps45P97390 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.35■□□□□ 0.37
Vps45P97390 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps45P97390 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps45P97390 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vps45P97390 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Gm16061-201ENSMUST00000122167 857 ntBASIC17.34■□□□□ 0.37
Vps45P97390 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.34■□□□□ 0.37
Vps45P97390 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.34■□□□□ 0.37
Vps45P97390 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps45P97390 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps45P97390 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.33■□□□□ 0.37
Vps45P97390 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps45P97390 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.33■□□□□ 0.37
Vps45P97390 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.33■□□□□ 0.37
Vps45P97390 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Vps45P97390 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps45P97390 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps45P97390 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.33■□□□□ 0.36
Vps45P97390 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.33■□□□□ 0.36
Vps45P97390 Gm27704-201ENSMUST00000185094 107 ntBASIC17.33■□□□□ 0.36
Vps45P97390 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Gm7461-201ENSMUST00000058918 827 ntBASIC17.33■□□□□ 0.36
Vps45P97390 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.33■□□□□ 0.36
Vps45P97390 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps45P97390 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Vps45P97390 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps45P97390 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vps45P97390 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps45P97390 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps45P97390 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps45P97390 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms