Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pkp1P97350 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pkp1P97350 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pkp1P97350 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pkp1P97350 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pkp1P97350 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pkp1P97350 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.66■□□□□ 0.74
Pkp1P97350 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pkp1P97350 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.66■□□□□ 0.74
Pkp1P97350 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pkp1P97350 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Pkp1P97350 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.65■□□□□ 0.74
Pkp1P97350 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pkp1P97350 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pkp1P97350 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pkp1P97350 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Pkp1P97350 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Pkp1P97350 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pkp1P97350 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Gm10252-201ENSMUST00000209541 832 ntBASIC19.64■□□□□ 0.73
Pkp1P97350 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.64■□□□□ 0.73
Pkp1P97350 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Pkp1P97350 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pkp1P97350 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.63■□□□□ 0.73
Pkp1P97350 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Pkp1P97350 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.63■□□□□ 0.73
Pkp1P97350 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.63■□□□□ 0.73
Pkp1P97350 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pkp1P97350 Gm13559-201ENSMUST00000120476 863 ntBASIC19.63■□□□□ 0.73
Pkp1P97350 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.63■□□□□ 0.73
Pkp1P97350 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Pkp1P97350 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pkp1P97350 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pkp1P97350 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pkp1P97350 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.62■□□□□ 0.73
Pkp1P97350 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.62■□□□□ 0.73
Pkp1P97350 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.62■□□□□ 0.73
Pkp1P97350 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.62■□□□□ 0.73
Pkp1P97350 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pkp1P97350 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.62■□□□□ 0.73
Pkp1P97350 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Gm10566-201ENSMUST00000086739 996 ntBASIC19.62■□□□□ 0.73
Pkp1P97350 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Pkp1P97350 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pkp1P97350 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pkp1P97350 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms