Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm44430-201ENSMUST00000203376 995 ntBASIC21.18■□□□□ 0.98
Nkx2-3P97334 Gm7729-201ENSMUST00000050143 801 ntBASIC21.18■□□□□ 0.98
Nkx2-3P97334 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-3P97334 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-3P97334 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-3P97334 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-3P97334 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-3P97334 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx2-3P97334 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.17■□□□□ 0.98
Nkx2-3P97334 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.17■□□□□ 0.98
Nkx2-3P97334 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Nkx2-3P97334 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx2-3P97334 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.17■□□□□ 0.98
Nkx2-3P97334 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx2-3P97334 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.17■□□□□ 0.98
Nkx2-3P97334 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nkx2-3P97334 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx2-3P97334 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-3P97334 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-3P97334 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.16■□□□□ 0.98
Nkx2-3P97334 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Gm15165-201ENSMUST00000118140 502 ntBASIC21.15■□□□□ 0.98
Nkx2-3P97334 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.15■□□□□ 0.98
Nkx2-3P97334 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx2-3P97334 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nkx2-3P97334 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nkx2-3P97334 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nkx2-3P97334 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nkx2-3P97334 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nkx2-3P97334 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Nkx2-3P97334 Gm7862-201ENSMUST00000121461 292 ntBASIC21.14■□□□□ 0.97
Nkx2-3P97334 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.14■□□□□ 0.97
Nkx2-3P97334 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nkx2-3P97334 AC161829.1-201ENSMUST00000220298 281 ntBASIC21.14■□□□□ 0.97
Nkx2-3P97334 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Nkx2-3P97334 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nkx2-3P97334 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nkx2-3P97334 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Nkx2-3P97334 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nkx2-3P97334 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Rprl3-201ENSMUST00000157400 290 ntBASIC21.13■□□□□ 0.97
Nkx2-3P97334 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.13■□□□□ 0.97
Nkx2-3P97334 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.13■□□□□ 0.97
Nkx2-3P97334 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-3P97334 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC21.12■□□□□ 0.97
Nkx2-3P97334 CT009713.7-201ENSMUST00000224689 571 ntBASIC21.12■□□□□ 0.97
Nkx2-3P97334 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-3P97334 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx2-3P97334 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nkx2-3P97334 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms