Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.51□□□□□ -0.57
PrkdcP97313 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.51□□□□□ -0.57
PrkdcP97313 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
PrkdcP97313 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.51□□□□□ -0.57
PrkdcP97313 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.51□□□□□ -0.57
PrkdcP97313 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.51□□□□□ -0.57
PrkdcP97313 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.51□□□□□ -0.57
PrkdcP97313 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.51□□□□□ -0.57
PrkdcP97313 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.51□□□□□ -0.57
PrkdcP97313 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.51□□□□□ -0.57
PrkdcP97313 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.51□□□□□ -0.57
PrkdcP97313 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
PrkdcP97313 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
PrkdcP97313 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.5□□□□□ -0.57
PrkdcP97313 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.5□□□□□ -0.57
PrkdcP97313 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.5□□□□□ -0.57
PrkdcP97313 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
PrkdcP97313 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.5□□□□□ -0.57
PrkdcP97313 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PrkdcP97313 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
PrkdcP97313 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.49□□□□□ -0.57
PrkdcP97313 Gm8825-201ENSMUST00000182565 998 ntBASIC11.49□□□□□ -0.57
PrkdcP97313 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
PrkdcP97313 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
PrkdcP97313 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
PrkdcP97313 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
PrkdcP97313 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.49□□□□□ -0.57
PrkdcP97313 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PrkdcP97313 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PrkdcP97313 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PrkdcP97313 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
PrkdcP97313 Gm4459-201ENSMUST00000118750 468 ntBASIC11.48□□□□□ -0.57
PrkdcP97313 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
PrkdcP97313 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.48□□□□□ -0.57
PrkdcP97313 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.48□□□□□ -0.57
PrkdcP97313 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.48□□□□□ -0.57
PrkdcP97313 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.48□□□□□ -0.57
PrkdcP97313 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.48□□□□□ -0.57
PrkdcP97313 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.48□□□□□ -0.57
PrkdcP97313 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
PrkdcP97313 Gm44335-201ENSMUST00000196879 141 ntBASIC11.48□□□□□ -0.57
PrkdcP97313 Gm44297-201ENSMUST00000198304 141 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms