Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Msx3P70354 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Msx3P70354 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msx3P70354 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msx3P70354 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.27■□□□□ 0.36
Msx3P70354 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Msx3P70354 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.27■□□□□ 0.36
Msx3P70354 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msx3P70354 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msx3P70354 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.27■□□□□ 0.36
Msx3P70354 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msx3P70354 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Msx3P70354 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Msx3P70354 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Msx3P70354 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msx3P70354 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Msx3P70354 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msx3P70354 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msx3P70354 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.26■□□□□ 0.35
Msx3P70354 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Msx3P70354 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.26■□□□□ 0.35
Msx3P70354 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.26■□□□□ 0.35
Msx3P70354 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.26■□□□□ 0.35
Msx3P70354 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Msx3P70354 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Msx3P70354 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msx3P70354 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.25■□□□□ 0.35
Msx3P70354 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.25■□□□□ 0.35
Msx3P70354 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.25■□□□□ 0.35
Msx3P70354 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.25■□□□□ 0.35
Msx3P70354 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Msx3P70354 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msx3P70354 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Msx3P70354 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Msx3P70354 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Msx3P70354 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.24■□□□□ 0.35
Msx3P70354 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.24■□□□□ 0.35
Msx3P70354 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.24■□□□□ 0.35
Msx3P70354 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.24■□□□□ 0.35
Msx3P70354 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Msx3P70354 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.24■□□□□ 0.35
Msx3P70354 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.24■□□□□ 0.35
Msx3P70354 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.24■□□□□ 0.35
Msx3P70354 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Msx3P70354 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msx3P70354 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msx3P70354 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Msx3P70354 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msx3P70354 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Msx3P70354 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msx3P70354 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Msx3P70354 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msx3P70354 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msx3P70354 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msx3P70354 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msx3P70354 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms