Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Surf6P70279 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.52■□□□□ 0.39
Surf6P70279 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Surf6P70279 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.51■□□□□ 0.39
Surf6P70279 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Surf6P70279 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Surf6P70279 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.51■□□□□ 0.39
Surf6P70279 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.51■□□□□ 0.39
Surf6P70279 Gm7514-201ENSMUST00000209475 934 ntBASIC17.51■□□□□ 0.39
Surf6P70279 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Surf6P70279 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Surf6P70279 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Surf6P70279 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Surf6P70279 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Surf6P70279 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.5■□□□□ 0.39
Surf6P70279 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Surf6P70279 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Surf6P70279 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Surf6P70279 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.49■□□□□ 0.39
Surf6P70279 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Surf6P70279 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Surf6P70279 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Surf6P70279 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Surf6P70279 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.49■□□□□ 0.39
Surf6P70279 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Gm12933-201ENSMUST00000120203 872 ntBASIC17.49■□□□□ 0.39
Surf6P70279 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.49■□□□□ 0.39
Surf6P70279 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.49■□□□□ 0.39
Surf6P70279 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.49■□□□□ 0.39
Surf6P70279 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Surf6P70279 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Surf6P70279 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Surf6P70279 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Surf6P70279 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Surf6P70279 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Surf6P70279 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.48■□□□□ 0.39
Surf6P70279 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Surf6P70279 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Surf6P70279 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.48■□□□□ 0.39
Surf6P70279 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Surf6P70279 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Surf6P70279 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.48■□□□□ 0.39
Surf6P70279 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Surf6P70279 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.48■□□□□ 0.39
Surf6P70279 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Surf6P70279 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.48■□□□□ 0.39
Surf6P70279 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Surf6P70279 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms