Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Six5P70178 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six5P70178 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six5P70178 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Six5P70178 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Six5P70178 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six5P70178 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six5P70178 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six5P70178 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Six5P70178 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.73■□□□□ 0.11
Six5P70178 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.73■□□□□ 0.11
Six5P70178 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.73■□□□□ 0.11
Six5P70178 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Six5P70178 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.73■□□□□ 0.11
Six5P70178 Gm7370-201ENSMUST00000219471 767 ntBASIC15.73■□□□□ 0.11
Six5P70178 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.73■□□□□ 0.11
Six5P70178 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Six5P70178 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six5P70178 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Six5P70178 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Six5P70178 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.72■□□□□ 0.11
Six5P70178 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Six5P70178 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Gm15565-201ENSMUST00000118890 427 ntBASIC15.72■□□□□ 0.11
Six5P70178 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Six5P70178 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.72■□□□□ 0.11
Six5P70178 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.72■□□□□ 0.11
Six5P70178 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Six5P70178 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Six5P70178 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Six5P70178 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six5P70178 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Six5P70178 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Gm6433-201ENSMUST00000118634 875 ntBASIC15.71■□□□□ 0.11
Six5P70178 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.71■□□□□ 0.11
Six5P70178 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Six5P70178 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six5P70178 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six5P70178 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Six5P70178 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Six5P70178 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Six5P70178 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.7■□□□□ 0.1
Six5P70178 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.7■□□□□ 0.1
Six5P70178 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.7■□□□□ 0.1
Six5P70178 Gm7889-201ENSMUST00000185591 958 ntBASIC15.7■□□□□ 0.1
Six5P70178 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Six5P70178 Gm45058-201ENSMUST00000205810 766 ntBASIC15.7■□□□□ 0.1
Six5P70178 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.7■□□□□ 0.1
Six5P70178 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six5P70178 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.69■□□□□ 0.1
Six5P70178 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms