Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.82□□□□□ -0.04
Sec61a1P61620 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sec61a1P61620 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.82□□□□□ -0.04
Sec61a1P61620 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sec61a1P61620 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sec61a1P61620 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sec61a1P61620 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sec61a1P61620 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sec61a1P61620 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.81□□□□□ -0.04
Sec61a1P61620 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.81□□□□□ -0.04
Sec61a1P61620 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a1P61620 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Sec61a1P61620 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sec61a1P61620 Mir6982-201ENSMUST00000184354 68 ntBASIC14.8□□□□□ -0.04
Sec61a1P61620 Gm10138-203ENSMUST00000206952 366 ntBASIC14.8□□□□□ -0.04
Sec61a1P61620 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.8□□□□□ -0.04
Sec61a1P61620 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.8□□□□□ -0.04
Sec61a1P61620 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.8□□□□□ -0.04
Sec61a1P61620 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.8□□□□□ -0.04
Sec61a1P61620 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a1P61620 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sec61a1P61620 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.79□□□□□ -0.04
Sec61a1P61620 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.79□□□□□ -0.04
Sec61a1P61620 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.79□□□□□ -0.04
Sec61a1P61620 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Gm6576-201ENSMUST00000169678 883 ntBASIC14.79□□□□□ -0.04
Sec61a1P61620 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.79□□□□□ -0.04
Sec61a1P61620 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.79□□□□□ -0.04
Sec61a1P61620 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sec61a1P61620 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a1P61620 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Sec61a1P61620 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms