Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.17■□□□□ 0.34
Tubgcp3P58854 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Mir5122-201ENSMUST00000175004 89 ntBASIC17.17■□□□□ 0.34
Tubgcp3P58854 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Gm7791-201ENSMUST00000219066 539 ntBASIC17.17■□□□□ 0.34
Tubgcp3P58854 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.17■□□□□ 0.34
Tubgcp3P58854 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tubgcp3P58854 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Gm21814-202ENSMUST00000203277 873 ntBASIC17.16■□□□□ 0.34
Tubgcp3P58854 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tubgcp3P58854 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.15■□□□□ 0.34
Tubgcp3P58854 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.15■□□□□ 0.34
Tubgcp3P58854 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubgcp3P58854 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tubgcp3P58854 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Gm27000-201ENSMUST00000182943 842 ntBASIC17.14■□□□□ 0.33
Tubgcp3P58854 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubgcp3P58854 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.13■□□□□ 0.33
Tubgcp3P58854 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms