Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.66■□□□□ 0.26
Atxn1P54254 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atxn1P54254 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Atxn1P54254 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.66■□□□□ 0.26
Atxn1P54254 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atxn1P54254 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Atxn1P54254 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.65■□□□□ 0.26
Atxn1P54254 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Atxn1P54254 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atxn1P54254 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Atxn1P54254 Gm37025-201ENSMUST00000195159 829 ntBASIC16.65■□□□□ 0.26
Atxn1P54254 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.65■□□□□ 0.26
Atxn1P54254 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Atxn1P54254 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atxn1P54254 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atxn1P54254 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atxn1P54254 Actl10-202ENSMUST00000226583 1501 ntBASIC16.65■□□□□ 0.26
Atxn1P54254 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atxn1P54254 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Atxn1P54254 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atxn1P54254 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atxn1P54254 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.64■□□□□ 0.25
Atxn1P54254 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atxn1P54254 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atxn1P54254 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Gm8000-201ENSMUST00000188378 592 ntBASIC16.64■□□□□ 0.25
Atxn1P54254 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.64■□□□□ 0.25
Atxn1P54254 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.64■□□□□ 0.25
Atxn1P54254 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Atxn1P54254 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.64■□□□□ 0.25
Atxn1P54254 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atxn1P54254 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atxn1P54254 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Atxn1P54254 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Atxn1P54254 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.63■□□□□ 0.25
Atxn1P54254 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Gm1401-201ENSMUST00000122048 772 ntBASIC16.63■□□□□ 0.25
Atxn1P54254 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.63■□□□□ 0.25
Atxn1P54254 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.63■□□□□ 0.25
Atxn1P54254 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Atxn1P54254 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.63■□□□□ 0.25
Atxn1P54254 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atxn1P54254 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Atxn1P54254 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atxn1P54254 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.62■□□□□ 0.25
Atxn1P54254 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.62■□□□□ 0.25
Atxn1P54254 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.62■□□□□ 0.25
Atxn1P54254 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.62■□□□□ 0.25
Atxn1P54254 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms